Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922801.1_cds_XP_016471566.1_63893
CDS Infomation

[gene=LOC107793690] [db_xref=GeneID:107793690] [protein=glutamyl-tRNA reductase 1, chloroplastic-like] [protein_id=XP_016471566.1] [location=complement(join(6630..7769,8224..8465,8840..9134))] [gbkey=CDS]
Sequence

ATGGCGGTAGCGAGTGGCTTTGCGACCTCTTTTGCAGGTGACAGTTTTCATTCTGATAAT
TTAAGTTCTACGTCTTGTTCTTCGTCTTTTTCTCCTTCTGTGGATTGTTTCCGTCATCAA
GTTAGATTTTTAGGAAACGGTCGAAGAATTAAGCCGTTGGTTTATTTGACAAAATCGCAT
TCGTTTACCCCTAGATGTGAGGTTGCTTCGAACTCGGTGGTTAATAATGGTGAAAAGGAA
TCTAAAGCATCGAGTCTTTCAGCTTTGGAGCTTCTGAAAACATCTGCTGCTGATAGATAT
ACAAAGAGTAGCAGCAGCATCATGGTTATTGGACTTAACATTCACACAGCACCAGTTGAA
GTGCGGGAGAAAGTCGCCATTCCAGAAGCACAGTGGCCTCAAGCAATTCGTGAACTATGT
TCCTTGAATCATATAGAGGAAGCTGCTGTATTGAGTACTTGTAACAGAATCGAAATATAT
GTTGTGGCGCTGGCCCAAAATCGTGGAATTAAAGAAGTGACTGAATGGATGTCTAAGTTT
AGTGGAGTTCCAGTTACAGAGCTTTGCCAACACCGGTTTTTGCTATACAATCAAGATGCC
ACACAACACCTGTTTGAAGTAGCTGCTGGGCTAGATTCCCTAGTCCTAGGAGAAGGACAA
ATTCTTGCACAGGTCAAGCAGGTTGTTAAGAATGGACAGGGCGTCCCTGGCTTTGGTAGG
AAAATAAGTGAGCTATTTAAGCATTCAATCACAGCCGGAAAGAGGGTTAGGACTGAGACC
AATATTTCCAGCGGATCAGTATCAGTAAGTTCAGCTGCAGTGGAGCTTGCTTTGCTGAAA
CTTCCGGAGTATTCTTCTTCTACTGCCCGCGTGTTAGTAGTTGGAGCAGGGAAGATGGGA
AAGCTTGTGATCAAACATTTGGTTGCTAAAGGGTGTAAAAAGATGGTTGTAGTTAACAGG
ACCGAGGACAGAGTTGCTGCCATCCGTGAGGAGTTGAAGGATGCTGAAATAATATACAAA
CCTCTCTCAGAAATGTCATCATGTGCTGCTCAGGCTGATGTAGTATTCACCTGCACTGCT
TCAGAAGCTCCTTTATTTGTAAAGGAGAGTGTTCAAGCACTTCCTGATGTGAACTCTGAA
TTTGGGGGACAGAGGCTATTTGTCGATATTTCTGTTCCTCGGAATGTGGAGCCTTGTGTC
TCAGAACTCAAAGGTGCACAAGTTTACAATGTGGACGATCTTAAAGAGGTTGTGGAAGCA
AATAAGGAGGATCGGTTGCGGAAGAAAATGGAAGCTCAGGCCATCATTGCCGAGGAAGTG
AAACAATTTGAAGCCCGTAAAGACTCCCTCGAGACGGTTCCAACTATCAAAAAGCTCAGG
GCATATGCTGAAAGAATTAGGGCTGCTGAGGTTGACAAGTGTTTGTCTAAGATGGGTGAT
GATCTCCCCAAAAACAAGAAGAAGGCTATCTATGATCTCAGTCTAGGGATAGTGAACAAG
CTGCTACATGGACCAATGCAGCATCTGAAATGTGATGGAACTGAAAACAGAACTTTGAGT
GAGATCCTTGAAAACATGCATGCCCTTAACAGAATATTTGGTCTTGATACAGAGATTTCT
GTATTGGAAGAGAAGTTACGAGCGAAGATAGAGCAAAATCAAAAGCAATCTTCTTGA

Peptide Sequence

PEP ID

XP_016471566.1
PEP Infomation

PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVASGFATSFAGDSFHSDNLSSTSCSSSFSPSVDCFRHQVRFLGNGRRIKPLVYLTKSH
SFTPRCEVASNSVVNNGEKESKASSLSALELLKTSAADRYTKSSSSIMVIGLNIHTAPVE
VREKVAIPEAQWPQAIRELCSLNHIEEAAVLSTCNRIEIYVVALAQNRGIKEVTEWMSKF
SGVPVTELCQHRFLLYNQDATQHLFEVAAGLDSLVLGEGQILAQVKQVVKNGQGVPGFGR
KISELFKHSITAGKRVRTETNISSGSVSVSSAAVELALLKLPEYSSSTARVLVVGAGKMG
KLVIKHLVAKGCKKMVVVNRTEDRVAAIREELKDAEIIYKPLSEMSSCAAQADVVFTCTA
SEAPLFVKESVQALPDVNSEFGGQRLFVDISVPRNVEPCVSELKGAQVYNVDDLKEVVEA
NKEDRLRKKMEAQAIIAEEVKQFEARKDSLETVPTIKKLRAYAERIRAAEVDKCLSKMGD
DLPKNKKKAIYDLSLGIVNKLLHGPMQHLKCDGTENRTLSEILENMHALNRIFGLDTEIS
VLEEKLRAKIEQNQKQSS

Transcript Sequence

Gene sequence data has not been registered.